PPDB

PPDB	The Plant Proteome Database

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AT5G14420.1 RING domain ligase2

Lab Annot.

RING domain ligase2
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G14420.2 11 Arabidopsis thaliana 0 468 100 100 0 (0) C
AT5G14420.3 11 Arabidopsis thaliana 0 468 100 100 0 (0) C
AT5G14420.4 11 Arabidopsis thaliana 0 468 100 100 0 (0) C
Os12g19030.1 7 Oryza sativa 0 390 72 82 0 (0) S
Os01g68060.1 7 Oryza sativa 0 396 70 81 0 (0) _
Os06g40650.2 7 Oryza sativa 0 404 66 77 0 (0) _
GRMZM2G073049_P01 3.21 Zea mays 0 423 68 78 0 (0) S
Zm00001eb133150_P001 agpv5 Zea mays 0 423 68 78 0 (0) S
Zm00001eb144000_P001 agpv5 Zea mays 0 414 68 80 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Copine(1) Prok-RING_4(2) vWA-TerF-like(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3HC4_3(1
TargetP:	Chloroplast (Class 5 C0.553; M0.433; S0.014; _0.095)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	468 aa (-cTP 449)
Molecular Weight	51.58 kDA(-cTP 49.43)
PI	5.43(-cTP 5.23)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data