PPDB

PPDB	The Plant Proteome Database

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AT5G14080.1 Tetratricopeptide repeat (TPR)-like superfamily protein

Lab Annot.

pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G64320.1 11 Arabidopsis thaliana 1E-45 581 25 43 0 (0) M
AT5G61990.1 11 Arabidopsis thaliana 2E-44 478 25 46 2 (2) M
AT1G62680.1 11 Arabidopsis thaliana 2E-38 374 27 49 0 (0) C
Os03g56960.1 7 Oryza sativa 5E-131 479 42 65 1 (1) M
Os07g48850.2 7 Oryza sativa 2E-39 543 24 45 0 (0) M
Os07g48850.1 7 Oryza sativa 2E-39 543 24 45 0 (0) M
Zm00001eb093300_P001 agpv5 Zea mays 2E-127 479 41 62 0 (0) C
v1_GRMZM2G131820_P01 4a53 Zea mays 2E-127 479 41 62 0 (0) C
GRMZM2G131820_P01 3.21 Zea mays 2E-127 479 41 62 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	ANAPC3(3) Clathrin(2) DUF3895(3) ECSIT(2) MNE1(1) MRP-S27(1) PPR(9) PPR_1(7) PPR
TargetP:	Mitochondria (Class 3 C0.069; M0.763; S0.004; _0.165)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	634 aa (-cTP 611)
Molecular Weight	71.36 kDA(-cTP )
PI	7.83(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
327	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
343	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
361	Detail								leaf [A. thaliana]	total leaf tissue 1.07	wild-type
371	Detail								leaf [A. thaliana]	total leaf tissue	clpr4-1
527	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt1)
528	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (wt2)
875	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
876	Detail								leaf [A. thaliana]	chloroplast thylakoid membrane	wild-type
1393	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 2)
1399	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	clpp3-1
1400	Detail								leaf [A. thaliana]	total leaf tissue 1.14 -rep. 1	wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

18431481(chloroplast)

Comparative Proteomics Data