PPDB

The Plant Proteome Database

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AT5G13920.1   GRF zinc finger / Zinc knuckle protein

Lab Annot.
Mapman: 27.3.11 RNA.regulation of transcription.C2H2 zinc finger family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G13920.2 11Arabidopsis thaliana044593930 (0)_
AT1G54930.2 11Arabidopsis thaliana3E-7142238520 (0)C
AT1G54930.1 11Arabidopsis thaliana2E-4141733450 (0)C
Os03g57260.2 7Oryza sativa1E-1519929420 (0)_
Os03g57260.1 7Oryza sativa7E-1115829400 (0)_
GRMZM2G069218_P01 3.21Zea mays5E-1519930420 (0)_
Zm00001eb059980_P001 agpv5Zea mays5E-1519930420 (0)_
v1_GRMZM2G069218_P01 4a53Zea mays7E-089232430 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Sec34(2) zf-CCHC(1) zf-CCHC_2(1) zf-GRF(2)
TargetP: Cytoplasm (Class 4 C0.112; M0.335; S0.040; _0.662)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 415 aa (-cTP 402)
Molecular Weight 46.31 kDA(-cTP )
PI 4.86(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help