PPDB

 The Plant Proteome Database

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AT5G13910.1   Integrase-type DNA-binding superfamily protein
Lab Annot.
Mapman: 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G28160.1 11Arabidopsis thaliana7E-407783920 (0)_
AT5G18560.1 11Arabidopsis thaliana3E-347578862 (2)C
AT1G12890.1 11Arabidopsis thaliana4E-308065810 (0)_
Os04g32790.1 7Oryza sativa1E-397684900 (0)C
Os02g32040.1 7Oryza sativa3E-377678880 (0)_
Os07g47330.1 7Oryza sativa5E-326090960 (0)C
GRMZM2G023708_P01 3.21Zea mays3E-408775850 (0)C
Zm00001eb421530_P001 agpv5Zea mays3E-408775850 (0)C
v1_GRMZM2G023708_P01 4a53Zea mays3E-408775850 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AP2(1)
TargetP: Cytoplasm (Class 4 C0.297; M0.273; S0.026; _0.591)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 211 aa (-cTP 147)
Molecular Weight 23.68 kDA(-cTP )
PI 4.98(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help