PPDB

PPDB	The Plant Proteome Database

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AT5G13720.1 Uncharacterized protein family (UPF0114)

Lab Annot.

ribonuclease domain (integral membrane protein)
Mapman: 35.2 not assigned.unknown

Curated Location

plastid (Pubmed: 23198870 12177442 ) (supported by in-house exprements)

TAIR curated location: chloroplast inner membrane0012177442

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G19390.1 11 Arabidopsis thaliana 9E-54 183 47 68 1 (1) C
AT4G19390.2 11 Arabidopsis thaliana 1E-53 185 47 68 0 (0) _
Os07g46330.1 7 Oryza sativa 9E-113 184 84 91 0 (0) M
Os07g46320.1 7 Oryza sativa 2E-102 184 80 89 0 (0) C
Os06g49640.1 7 Oryza sativa 8E-52 184 48 69 0 (0) M
GRMZM2G133400_P01 3.21 Zea mays 2E-113 239 69 79 107 (107) C
v1_GRMZM2G133400_P01 4a53 Zea mays 2E-113 239 69 79 95 (95) C
Zm00001eb329550_P001 agpv5 Zea mays 2E-113 239 69 79 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
342	Detail								leaf [A. thaliana]	chloroplast low density membrane	wild-type
877	Detail								leaf [A. thaliana]	chloroplast stroma	wild-type
1349	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 2)
1350	Detail								leaf [A. thaliana]	total tissue (5 day HL)	abck2xabck3 (rep. 3)
1440	Detail								leaf [A. thaliana]	total tissue (0 day HL)	wild-type (rep. 2)
1442	Detail								leaf [A. thaliana]	total tissue (0 day HL)	abck2xabck3 (rep. 1)

* For details about the exprimental sources click here.

Published Proteomics Data

12766230(Total chloroplast envelope)
18431481(chloroplast)
20061580(chloroplast envelope (inner+outer))
19995723(chloroplast reference proteome)

Comparative Proteomics Data