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AT5G13720.1
Uncharacterized protein family (UPF0114)
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| Lab Annot. |
ribonuclease domain (integral membrane protein)
Mapman: 35.2 not assigned.unknown |
| Curated Location |
plastid (Pubmed: 23198870 12177442 ) (supported by in-house exprements)
TAIR curated location: chloroplast inner membrane0012177442 |
| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
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Related Genes
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#Spots: The number of publicly accessible spots are in parenthesis
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| Prediction |
| PFAM: |
UPF0114(1) |
| TargetP: |
Chloroplast (Class 2 C0.872; M0.145; S0.093; _0.006) |
| Predotar: |
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| Subcel. Location: |
Transmembrane |
| TM-HMM prediction: |
3 TMs |
| Aramemnon: |
3 TMs |
| TAT position: |
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| Length |
262 aa (-cTP 202) |
| Molecular Weight |
28.91 kDA(-cTP 22.61) |
| PI |
9.03(-cTP 8.64) |
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Experimental Evidence
Expand
View Identified Peptides
View GeneModel
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| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 342 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast low density membrane | wild-type |
| 877 | Detail | | | | | | | | leaf [A. thaliana] | chloroplast stroma | wild-type |
| 1349 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (5 day HL) | abck2xabck3 (rep. 2) |
| 1350 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (5 day HL) | abck2xabck3 (rep. 3) |
| 1440 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | wild-type (rep. 2) |
| 1442 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (0 day HL) | abck2xabck3 (rep. 1) |
| 2324 | Detail | | | | | | | | leaf [A. thaliana] | THYLAKOIDS thylakoid membrane | |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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12766230(Total chloroplast envelope)
18431481(chloroplast)
20061580(chloroplast envelope (inner+outer))
19995723(chloroplast reference proteome)
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Comparative Proteomics Data
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