PPDB

PPDB	The Plant Proteome Database

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AT5G13710.1 sterol methyltransferase 1

Lab Annot.

SMT1 (STEROL METHYLTRANSFERASE 1)
Mapman: 17.3.1.2.2 hormone metabolism.brassinosteroid.synthesis-degradation.sterols.SMT

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G13710.2 11 Arabidopsis thaliana 0 336 100 100 28 (24) _
AT1G76090.1 11 Arabidopsis thaliana 6E-86 335 41 57 4 (4) S
AT1G20330.1 11 Arabidopsis thaliana 3E-84 330 40 57 35 (26) S
Os07g10600.1 7 Oryza sativa 0 335 79 90 15 (15) C
Os07g10600.2 7 Oryza sativa 0 335 79 90 15 (15) _
Os03g59290.1 7 Oryza sativa 1E-172 319 69 81 0 (0) _
v1_GRMZM2G122810_P03 4a53 Zea mays 0 335 79 91 20 (19) _
v1_GRMZM2G122810_P01 4a53 Zea mays 0 335 79 91 20 (19) _
v1_GRMZM2G122810_P05 4a53 Zea mays 0 335 79 91 20 (19) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CMAS(1) Methyltransf_11(1) Methyltransf_12(1) Methyltransf_23(1) Methyltransf_25
TargetP:	Cytoplasm (Class 2 C0.051; M0.068; S0.227; _0.908)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	336 aa (-cTP 319)
Molecular Weight	38.27 kDA(-cTP )
PI	5.85(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1405	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1406	Detail								leaf [A. thaliana]	total leaf tissue 1.07 rep 2.	wild-type
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1529	Detail								leaf [A. thaliana]	total leaf tissue - 0 uM CAP	wild-type (rep. 1)
1530	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	wild-type (rep. 1)
1531	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	wild-type (rep. 1)
1533	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	clps (rep. 1)
1534	Detail								leaf [A. thaliana]	total leaf tissue - 40 uM CAP	clps (rep. 1)
1744	Detail								[A. thaliana]		Mep-6
2010	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2011	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2012	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2014	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2015	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2016	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2020	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1xopda1-2
2246	Detail								seedlings [A. thaliana]	total tissue	gfs9
2252	Detail								seedlings [A. thaliana]	total tissue	gfs9
2287	Detail								[A. thaliana]		Clp C1 WT
2288	Detail								[A. thaliana]		Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

15539469(vacuole)
19200160(flower-stage 12)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
19114538(guard cells Arabidopsis leaf)
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
21173025(root proteome)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data