PPDB

 The Plant Proteome Database

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AT5G13710.1   sterol methyltransferase 1
Lab Annot. SMT1 (STEROL METHYLTRANSFERASE 1)
Mapman: 17.3.1.2.2 hormone metabolism.brassinosteroid.synthesis-degradation.sterols.SMT
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G13710.2 11Arabidopsis thaliana033610010028 (22)_
AT1G76090.1 11Arabidopsis thaliana6E-8633541574 (4)S
AT1G20330.1 11Arabidopsis thaliana3E-84330405735 (24)S
Os07g10600.1 7Oryza sativa0335799015 (15)C
Os07g10600.2 7Oryza sativa0335799015 (15)_
Os03g59290.1 7Oryza sativa1E-17231969810 (0)_
v1_GRMZM2G122810_P03 4a53Zea mays0335799120 (19)_
v1_GRMZM2G122810_P01 4a53Zea mays0335799120 (19)_
v1_GRMZM2G122810_P05 4a53Zea mays0335799120 (19)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: CMAS(1) Methyltransf_11(1) Methyltransf_12(1) Methyltransf_23(1) Methyltransf_25
TargetP: Cytoplasm (Class 2 C0.051; M0.068; S0.227; _0.908)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 336 aa (-cTP 319)
Molecular Weight 38.27 kDA(-cTP )
PI 5.85(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1405Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1406Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 2. wild-type
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1431Detail       leaf [A. thaliana] total tissue (2% sucrose) wild-type (rep. 2)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1530Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP wild-type (rep. 1)
1531Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP wild-type (rep. 1)
1533Detail       leaf [A. thaliana] total leaf tissue - 30 uM CAP clps (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
1744Detail        [A. thaliana] Mep-6
2010Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2011Detail       leaf [A. thaliana] total leaf tissue opda1-2
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2014Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1
2015Detail       leaf [A. thaliana] total leaf tissue opda1-2
2016Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2020Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2246Detail       seedlings [A. thaliana] total tissue gfs9
2252Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

 15539469(vacuole)
19200160(flower-stage 12)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
19114538(guard cells Arabidopsis leaf)
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
21173025(root proteome)
21988472(vacuole (unfiltered data))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help