PPDB

The Plant Proteome Database

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AT5G13530.1   protein kinases%3Bubiquitin-protein ligase

Lab Annot. kinase at the outer chloroplast membrane 1 (KOC1)
Mapman: 29.4.1 protein.postranslational modification.kinase
Curated Location envelope-outer (Pubmed: 28283569 )
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G13530.2 11Arabidopsis thaliana0162599992 (1)_
AT4G32250.2 11Arabidopsis thaliana1E-31263325010 (10)_
AT4G32250.1 11Arabidopsis thaliana1E-31263325010 (10)_
Os05g32570.1 7Oryza sativa0819718515 (15)M
Os06g43270.1 7Oryza sativa1E-3129928470 (0)_
Os04g47240.1 7Oryza sativa9E-1525726460 (0)C
GRMZM5G806947_P01 3.21Zea mays083671860 (0)_
Zm00001eb287260_P001 agpv5Zea mays0162466820 (0)_
Zm00001eb287260_P002 agpv5Zea mays0164965800 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Ank(7) Ank_2(3) Ank_3(6) Ank_4(7) Ank_5(8) BPL_C(3) DUF5666(2) FYVE(1) NHase_bet
TargetP: Cytoplasm (Class 4 C0.124; M0.139; S0.035; _0.459)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1625 aa (-cTP 1571)
Molecular Weight 178.21 kDA(-cTP )
PI 5.83(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19376835(leaf phosphoproteins)
21166475(cytosolic-fractions-crude)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help