PPDB

 The Plant Proteome Database

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AT5G13400.1   Major facilitator superfamily protein
Lab Annot.
Mapman: 34.13 transport.peptides and oligopeptides
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G01180.1 11Arabidopsis thaliana5E-14556442600 (0)_
AT5G01180.3 11Arabidopsis thaliana5E-14556442600 (0)_
AT5G01180.2 11Arabidopsis thaliana5E-14556442600 (0)_
Os01g01360.1 7Oryza sativa056266780 (0)_
Os03g51050.1 7Oryza sativa8E-14257740580 (0)_
Os01g04950.2 7Oryza sativa2E-13857340590 (0)_
Zm00001eb126980_P002 agpv5Zea mays063066760 (0)C
Zm00001eb126980_P001 agpv5Zea mays063066760 (0)C
Zm00001eb126980_P003 agpv5Zea mays063070810 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: MerE(1) PTR2(1) Saf_2TM(3)
TargetP: Chloroplast (Class 5 C0.709; M0.023; S0.042; _0.606)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 12 TMs
Aramemnon: 12 TMs
TAT position:
Length 624 aa (-cTP 586)
Molecular Weight 69.07 kDA(-cTP 64.85)
PI 8.35(-cTP 8.20)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help