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PPDB	The Plant Proteome Database

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AT5G13390.1 no exine formation 1

Lab Annot.

NEF1 - (no exine formation) - lipid accumulation
Mapman: 11 lipid metabolism

Curated Location

plastid (Pubmed: 15225283 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G13390.2 11 Arabidopsis thaliana 0 1126 99 99 0 (0) C
Os11g32470.1 7 Oryza sativa 0 468 59 78 2 (2) C
Zm00001eb113290_P003 agpv5 Zea mays 0 1045 61 78 0 (0) C
Zm00001eb113290_P002 agpv5 Zea mays 0 1045 61 78 0 (0) C
GRMZM2G056103_P02 3.21 Zea mays 0 1045 61 78 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	7tm_2(1) AmoA(1) COPI_assoc(1) Cytochrom_C_asm(1) DUF368(1) DUF456(1) DUF81(1) M
TargetP:	Chloroplast (Class 3 C0.736; M0.112; S0.001; _0.154)
Predotar:
Subcel. Location:	Transmembrane
TM-HMM prediction:	27 TMs
Aramemnon:	29 TMs
TAT position:
Length	1123 aa (-cTP 1064) (-lTP 1004)
Molecular Weight	124.28 kDA(-cTP 117.73)(-lTP 111.49)
PI	9.12(-cTP 9.01)(-lTP 9.040)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

21515685(GreenCut2)

Comparative Proteomics Data