PPDB

PPDB	The Plant Proteome Database

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AT5G13360.1 Auxin-responsive GH3 family protein

Lab Annot.

Auxin-responsive GH3 protein
Mapman: 17.2.3 hormone metabolism.auxin.induced-regulated-responsive-activated

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G13360.3 11 Arabidopsis thaliana 0 594 100 100 20 (6) _
AT5G13360.2 11 Arabidopsis thaliana 0 594 100 100 20 (6) _
AT5G13370.1 11 Arabidopsis thaliana 0 595 85 93 20 (15) _
Os07g47490.2 7 Oryza sativa 0 580 50 67 0 (0) _
Os07g47490.1 7 Oryza sativa 0 580 50 67 0 (0) _
Os07g47490.3 7 Oryza sativa 0 572 50 67 0 (0) _
Zm00001eb113360_P002 agpv5 Zea mays 0 604 48 64 0 (0) _
Zm00001eb113360_P003 agpv5 Zea mays 0 604 48 64 0 (0) _
v1_GRMZM2G410567_P01 4a53 Zea mays 0 604 48 64 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	GH3(1)
TargetP:	Cytoplasm (Class 2 C0.041; M0.119; S0.122; _0.855)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	594 aa (-cTP 566)
Molecular Weight	66.95 kDA(-cTP )
PI	5.26(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2013	Detail								leaf [A. thaliana]	total leaf tissue	wt
2014	Detail								leaf [A. thaliana]	total leaf tissue	prep1-1xprep2-1
2253	Detail								seedlings [A. thaliana]	total tissue	atg5
2296	Detail								[A. thaliana]		Clp C1 WT
2302	Detail								[A. thaliana]		Clp C1 WT
2303	Detail								[A. thaliana]		Clp C1 WT

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)

Comparative Proteomics Data