PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G13310.1   hypothetical protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G13310.2 11Arabidopsis thaliana03701001000 (0)C
AT5G13970.1 11Arabidopsis thaliana5E-2842030470 (0)S
Os04g32580.1 7Oryza sativa3E-1134028420 (0)_
GRMZM2G149543_P01 3.21Zea mays2E-1733728440 (0)_
v1_GRMZM2G149543_P01 4a53Zea mays2E-1733728440 (0)_
Zm00001eb421370_P001 agpv5Zea mays2E-1733728440 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: TSSC4(1)
TargetP: Chloroplast (Class 1 C0.950; M0.037; S0.024; _0.142)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 370 aa (-cTP 335)
Molecular Weight 41.06 kDA(-cTP 37.37)
PI 4.58(-cTP 4.53)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help