PPDB

The Plant Proteome Database

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AT5G13250.1   RING finger protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G13250.2 11Arabidopsis thaliana03271001000 (0)S
AT1G28080.2 11Arabidopsis thaliana1E-3023236500 (0)_
AT1G28080.1 11Arabidopsis thaliana4E-3022736510 (0)_
Os04g32510.1 7Oryza sativa1E-198158720 (0)_
Os12g29500.1 7Oryza sativa2E-185961840 (0)_
Os03g43360.2 7Oryza sativa1E-1411142550 (0)_
Zm00001eb084940_P002 agpv5Zea mays2E-3313253690 (0)M
Zm00001eb363740_P001 agpv5Zea mays7E-2813045640 (0)M
GRMZM2G010176_P01 3.21Zea mays7E-2813045640 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF3337(2) GEMIN8(1) Presenilin(1) RAWUL(1)
TargetP: Secreted (Class 4 C0.316; M0.056; S0.619; _0.116)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 387 aa (-cTP 384)
Molecular Weight 43.74 kDA(-cTP )
PI 6.15(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help