PPDB

The Plant Proteome Database

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AT5G13000.2   glucan synthase-like 12

Lab Annot. glucan synthase-like 12
Mapman: 3.6 minor CHO metabolism.callose
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links PeptideAtlas   POGS   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G13000.1 11Arabidopsis thaliana0195597975 (5)M
AT1G05570.3 11Arabidopsis thaliana0196375860 (0)_
AT1G05570.4 11Arabidopsis thaliana0196375860 (0)_
Os03g03610.1 7Oryza sativa0196270810 (0)M
Os03g03610.3 7Oryza sativa0196270810 (0)M
Os03g03610.2 7Oryza sativa0196270810 (0)M
v1_GRMZM2G430680_P02 4a53Zea mays0194974847 (7)C
GRMZM2G430680_P02 3.21Zea mays01949748413 (13)C
Zm00001eb271900_P001 agpv5Zea mays0194974840 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: FKS1_dom1(1) Glucan_synthase(1) Vta1(1)
TargetP: Mitochondria (Class 5 C0.224; M0.493; S0.016; _0.315)
Predotar:
Subcel. Location:
TM-HMM prediction: 16 TMs
Aramemnon: 10 TMs
TAT position:
Length 1914 aa (-cTP 1892)
Molecular Weight 221.53 kDA(-cTP )
PI 8.99(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1421Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1423Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 3)
1426Detail       leaf [A. thaliana] total leaf tissue prep1xprep2xt1xt2 (rep. 3)
2013Detail       leaf [A. thaliana] total leaf tissue wt

* For details about the exprimental sources click here.

Published Proteomics Data

21533090(plasmodesmata-crude)
20843791(DRM-enriched plasmamembrane)
20733066(phosphoproteome-ABA-leaf)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help