PPDB

PPDB	The Plant Proteome Database

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AT5G12930.1 inactive rhomboid protein

Lab Annot.

Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
Os09g31350.1 7 Oryza sativa 2E-49 298 37 59 0 (0) C
Zm00001eb101890_P002 agpv5 Zea mays 3E-49 415 34 55 0 (0) C
v1_GRMZM2G120091_P02 4a53 Zea mays 3E-49 415 34 55 0 (0) C
GRMZM2G120091_P02 3.21 Zea mays 3E-49 415 34 55 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CC2-LZ(2) Cortex-I_coil(2) DUF2199(1) GAS(2) Med4(2) NYD-SP28(3) Sec2p(2) Spc29(
TargetP:	Chloroplast (Class 5 C0.564; M0.092; S0.008; _0.554)
Predotar:
Subcel. Location:	Lumen
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	439 aa (-cTP 378) (-lTP 357)
Molecular Weight	48.57 kDA(-cTP 41.82)(-lTP 39.76)
PI	8.69(-cTP 8.60)(-lTP 8.882)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data