PPDB

PPDB	The Plant Proteome Database

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AT5G12900.1 DNA double-strand break repair RAD50 ATPase

Lab Annot.

Mapman: 35.2 not assigned.unknown

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G12330.1 11 Arabidopsis thaliana 9E-72 317 40 62 0 (0) C
AT2G45260.1 11 Arabidopsis thaliana 6E-14 308 24 43 0 (0) _
AT3G60680.1 11 Arabidopsis thaliana 3E-11 123 34 48 0 (0) _
Os08g39740.1 7 Oryza sativa 3E-164 582 46 64 0 (0) C
Os09g31370.1 7 Oryza sativa 2E-145 602 44 58 0 (0) C
Os03g14500.1 7 Oryza sativa 8E-47 359 33 46 0 (0) _
GRMZM2G001541_P01 3.21 Zea mays 4E-155 580 45 63 0 (0) C
Zm00001eb199840_P001 agpv5 Zea mays 4E-155 580 45 63 0 (0) C
v1_GRMZM2G001541_P01 4a53 Zea mays 4E-155 580 45 63 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Apolipo_F(1) ATG16(1) CASP_C(1) CENP-F_leu_zip(1) DUF745(1) GAS(1) HAUS-augmin3(
TargetP:	Chloroplast (Class 4 C0.752; M0.066; S0.003; _0.358)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:	1 TMs
TAT position:
Length	562 aa (-cTP 481)
Molecular Weight	63.33 kDA(-cTP 54.59)
PI	8.41(-cTP 8.28)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data