PPDB

PPDB	The Plant Proteome Database

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AT5G12850.1 CCCH-type zinc finger protein with ARM repeat domain-containing protein

Lab Annot.

zinc finger (CCCH-type) protein
Mapman: 27.3.12 RNA.regulation of transcription.C3H zinc finger family

Curated Location

TAIR curated location: cytoplasm15610358

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G41900.1 11 Arabidopsis thaliana 0 715 50 65 1 (1) _
AT5G58620.1 11 Arabidopsis thaliana 2E-144 647 43 57 0 (0) S
AT2G40140.1 11 Arabidopsis thaliana 4E-129 720 37 51 0 (0) _
Os03g49170.1 7 Oryza sativa 0 712 48 62 0 (0) _
Os03g49170.3 7 Oryza sativa 0 712 48 62 0 (0) _
Os07g38090.2 7 Oryza sativa 2E-150 686 43 57 0 (0) _
Zm00001eb053870_P003 agpv5 Zea mays 0 715 48 62 0 (0) _
v1_GRMZM2G001279_P01 4a53 Zea mays 0 719 47 61 1 (1) _
Zm00001eb216910_P001 agpv5 Zea mays 0 716 48 62 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Ank(2) Ank_2(1) Ank_3(2) Ank_4(2) Ank_5(2) Torus(1) zf-CCCH(2) zf-CCCH_2(3) zf-C
TargetP:	Cytoplasm (Class 1 C0.060; M0.087; S0.097; _0.926)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	706 aa (-cTP 628)
Molecular Weight	77.77 kDA(-cTP )
PI	6.48(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data