PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G12430.1   Heat shock protein DnaJ with tetratricopeptide repeat-containing protein

Lab Annot. J-domain protein DjC34 (type 3)
Mapman: 26.29* misc. DnaJ domain with unknown function
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G41520.3 11Arabidopsis thaliana9E-17758549680 (0)_
AT2G41520.1 11Arabidopsis thaliana4E-17658549680 (0)C
AT2G41520.2 11Arabidopsis thaliana7E-15658546640 (0)C
Os05g31062.1 7Oryza sativa2E-11433953720 (0)_
Os01g16680.1 6Oryza sativa2E-5917054770 (0)_
Os05g31056.1 7Oryza sativa5E-4524143570 (0)_
Zm00001eb128010_P003 agpv5Zea mays2E-17466145640 (0)C
Zm00001eb128010_P002 agpv5Zea mays5E-17466145640 (0)C
GRMZM2G348697_P02 3.21Zea mays2E-16853250700 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ANAPC3(2) ATP-synt_E_2(2) BTAD(2) DnaJ(1) TPR_1(7) TPR_10(5) TPR_11(4) TPR_12(6)
TargetP: Chloroplast (Class 1 C0.980; M0.031; S0.004; _0.063)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1165 aa (-cTP 1117)
Molecular Weight 129.18 kDA(-cTP 124.12)
PI 6.37(-cTP 6.05)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))
22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help