PPDB

The Plant Proteome Database

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AT5G12410.1   THUMP domain-containing protein

Lab Annot. THUMP domain-containing protein
Mapman: 35.1 not assigned.no ontology
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os11g36060.1 7Oryza sativa1E-118368517024 (24)_
Os11g36060.2 7Oryza sativa2E-100344496824 (24)_
Os11g34820.1 7Oryza sativa2E-135658830 (0)_
v1_GRMZM2G104375_P01 4a53Zea mays4E-118372516912 (12)_
Zm00001eb200070_P001 agpv5Zea mays4E-11837251690 (0)_
GRMZM2G104375_P01 3.21Zea mays4E-118372516915 (13)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: THUMP(3)
TargetP: Cytoplasm (Class 3 C0.088; M0.290; S0.062; _0.756)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 376 aa (-cTP 337)
Molecular Weight 41.94 kDA(-cTP )
PI 5.25(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2290Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19200160(flower-stage 12)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help