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AT5G12370.1 exocyst complex component sec10

Lab Annot.

SEC10 (EXOCYST COMPLEX COMPONENT SEC10)
Mapman: 35.1 not assigned.no ontology

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G12370.2 11 Arabidopsis thaliana 0 825 100 100 56 (15) _
AT5G12370.3 11 Arabidopsis thaliana 0 825 99 99 56 (15) _
Os12g13590.1 7 Oryza sativa 0 809 72 85 25 (25) _
Os12g13590.2 7 Oryza sativa 0 638 74 88 25 (25) _
Zm00001eb133590_P001 agpv5 Zea mays 0 804 72 84 0 (0) _
Zm00001eb133590_P003 agpv5 Zea mays 0 465 72 84 0 (0) _
Zm00001eb133590_P002 agpv5 Zea mays 0 449 73 88 0 (0) S
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Baculo_PEP_C(2) BLOC1_2(2) COG4(1) COG5(2) DUF2959(3) DUF5696(1) Sec10(2)
TargetP:	Cytoplasm (Class 4 C0.069; M0.424; S0.052; _0.700)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	825 aa (-cTP 751)
Molecular Weight	89.69 kDA(-cTP )
PI	5.23(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1417	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 2)
1418	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	clpr4-1 (rep. 3)
1422	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 2)
1423	Detail								leaf [A. thaliana]	total leaf tissue	wild-type (rep. 3)
1425	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 2)
1426	Detail								leaf [A. thaliana]	total leaf tissue	prep1xprep2xt1xt2 (rep. 3)
1431	Detail								leaf [A. thaliana]	total tissue (2% sucrose)	wild-type (rep. 2)
1494	Detail								leaf [A. thaliana]
1533	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	clps (rep. 1)
1766	Detail								leaf [A. thaliana]	Thylakoids thylakoid membrane	Met1-1
2009	Detail								leaf [A. thaliana]	total leaf tissue	wild-type
2013	Detail								leaf [A. thaliana]	total leaf tissue	wt
2246	Detail								seedlings [A. thaliana]	total tissue	gfs9
2253	Detail								seedlings [A. thaliana]	total tissue	atg5

* For details about the exprimental sources click here.

Published Proteomics Data

17644812(plasma membrane - suspension cells)
17432890(leaf total membranes)
19245862(nuclear phosphoproteins (seedlings & cell culture))
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21173025(root proteome)
21768351(Leaf-Phosphoproteome)
21189294(nuclear pore complex (co-IPs RAE1,Nup43,50a,93a,136))
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data