PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G12330.1   Lateral root primordium (LRP) protein-like protein

Lab Annot.
Mapman: 33.99 development.unspecified
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G12330.4 11Arabidopsis thaliana03201001000 (0)M
AT5G12330.2 11Arabidopsis thaliana03201001000 (0)_
AT5G12330.3 11Arabidopsis thaliana6E-1572141001000 (0)_
Os01g72490.2 7Oryza sativa3E-6219855720 (0)_
Os01g72490.1 7Oryza sativa3E-6219855720 (0)_
Os05g32070.1 7Oryza sativa4E-5919953660 (0)S
GRMZM2G077752_P01 3.21Zea mays1E-5520852670 (0)_
v1_GRMZM2G077752_P01 4a53Zea mays1E-5520852670 (0)_
Zm00001eb362740_P001 agpv5Zea mays1E-5520852670 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF702(1)
TargetP: Cytoplasm (Class 3 C0.024; M0.159; S0.110; _0.706)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 320 aa (-cTP 287)
Molecular Weight 33.62 kDA(-cTP )
PI 8.77(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help