PPDB

The Plant Proteome Database

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AT5G12310.1   RING/U-box superfamily protein

Lab Annot. zinc finger (C3HC4-type RING finger) protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G19430.1 11Arabidopsis thaliana2E-10925967790 (0)_
AT5G19430.6 11Arabidopsis thaliana2E-10925967790 (0)_
AT5G19430.2 11Arabidopsis thaliana2E-10323570800 (0)_
Os01g72480.1 7Oryza sativa1E-7020156690 (0)C
Zm00001eb140640_P001 agpv5Zea mays2E-5821049640 (0)C
v1_GRMZM2G168707_P01 4a53Zea mays5E-5521048620 (0)C
GRMZM2G168707_P01 3.21Zea mays5E-5521048620 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Dsh_C(1) DUF1272(1) Prok-RING_4(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3
TargetP: Cytoplasm (Class 3 C0.124; M0.059; S0.231; _0.773)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 254 aa (-cTP 246)
Molecular Weight 28.49 kDA(-cTP )
PI 5.06(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

20706207(contaminants cell cycle interactome (cell culture))

Comparative Proteomics Data


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