PPDB

PPDB	The Plant Proteome Database

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AT5G12310.1 RING/U-box superfamily protein

Lab Annot.

zinc finger (C3HC4-type RING finger) protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G19430.1 11 Arabidopsis thaliana 2E-109 259 67 79 0 (0) _
AT5G19430.6 11 Arabidopsis thaliana 2E-109 259 67 79 0 (0) _
AT5G19430.2 11 Arabidopsis thaliana 2E-103 235 70 80 0 (0) _
Os01g72480.1 7 Oryza sativa 1E-70 201 56 69 0 (0) C
Zm00001eb140640_P001 agpv5 Zea mays 2E-58 210 49 64 0 (0) C
v1_GRMZM2G168707_P01 4a53 Zea mays 5E-55 210 48 62 0 (0) C
GRMZM2G168707_P01 3.21 Zea mays 5E-55 210 48 62 0 (0) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Dsh_C(1) DUF1272(1) Prok-RING_4(1) zf-ANAPC11(1) zf-C3HC4(1) zf-C3HC4_2(1) zf-C3
TargetP:	Cytoplasm (Class 3 C0.124; M0.059; S0.231; _0.773)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	254 aa (-cTP 246)
Molecular Weight	28.49 kDA(-cTP )
PI	5.06(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

20706207(contaminants cell cycle interactome (cell culture))

Comparative Proteomics Data