PPDB

The Plant Proteome Database

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AT5G12280.1   SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein

Lab Annot. SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G12280.2 11Arabidopsis thaliana2E-11416498980 (0)_
AT5G12280.3 11Arabidopsis thaliana2E-10316592930 (0)_
AT1G14650.3 11Arabidopsis thaliana9E-399478870 (0)_
Os02g14780.2 7Oryza sativa2E-2396537520 (20)_
Os02g14780.1 7Oryza sativa2E-2396537520 (20)_
Zm00001eb333220_P001 agpv5Zea mays4E-239651750 (0)C
GRMZM2G028156_P01 3.21Zea mays4E-2396517525 (12)_
Zm00001eb333220_P004 agpv5Zea mays4E-239651750 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Surp(2) ubiquitin(1)
TargetP: Cytoplasm (Class 5 C0.515; M0.080; S0.023; _0.581)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 419 aa (-cTP 362)
Molecular Weight 47.28 kDA(-cTP )
PI 6.00(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help