PPDB

The Plant Proteome Database

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AT5G12120.1   Ubiquitin-associated/translation elongation factor EF1B protein

Lab Annot. ubiquitin-associated (UBA)/TS-N domain-containing protein
Mapman: 29.5.11 protein.degradation.ubiquitin
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G26920.1 11Arabidopsis thaliana2E-13568042590 (0)C
Os05g33850.1 7Oryza sativa8E-7132846610 (0)C
GRMZM2G047607_P01 3.21Zea mays1E-7562036510 (0)C
Zm00001eb287870_P001 agpv5Zea mays1E-7562036510 (0)C
Zm00001eb287870_P002 agpv5Zea mays1E-7562036510 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: BATS(2)
TargetP: Chloroplast (Class 4 C0.811; M0.044; S0.019; _0.451)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 619 aa (-cTP 566)
Molecular Weight 67.88 kDA(-cTP 62.40)
PI 6.91(-cTP 6.28)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
21173025(root proteome)

Comparative Proteomics Data


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