PPDB

The Plant Proteome Database

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AT5G12030.1   heat shock protein 17.6A

Lab Annot. small heat shock protein sHSP 17.7 - Class CII
Mapman: 20.2.1 stress.abiotic.heat
Curated Location
TAIR curated location: cytosol11576425
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G12020.1 11Arabidopsis thaliana3E-8415583926 (0)_
AT1G53540.1 11Arabidopsis thaliana3E-2611840663 (3)_
AT4G10250.1 11Arabidopsis thaliana8E-2415535563 (3)S
Os01g08860.1 7Oryza sativa4E-44156577523 (23)_
Os02g12610.1 7Oryza sativa2E-3113353730 (0)_
Os01g08860.2 7Oryza sativa1E-30153476010 (10)_
GRMZM2G034157_P01 3.21Zea mays2E-44155567616 (16)_
Zm00001eb337690_P001 agpv5Zea mays2E-4415556760 (0)_
v1_GRMZM2G034157_P01 4a53Zea mays2E-44155567610 (10)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ArsA_HSP20(1) FKBP26_C(2) HSP20(1) PIH1_CS(1)
TargetP: Cytoplasm (Class 2 C0.111; M0.086; S0.151; _0.837)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 156 aa (-cTP 122)
Molecular Weight 17.69 kDA(-cTP )
PI 5.59(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1349Detail       leaf [A. thaliana] total tissue (5 day HL) abck2xabck3 (rep. 2)
2249Detail       seedlings [A. thaliana] total tissue gfs9

* For details about the exprimental sources click here.

Published Proteomics Data

11402211,12068122,15047896,16679420,17028149(seed-all-Jobpapers)
18599647(seed proteome)
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help