PPDB

The Plant Proteome Database

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AT5G11890.1   harpin-induced protein

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G17620.1 11Arabidopsis thaliana2E-3429036520 (0)_
AT2G27080.2 11Arabidopsis thaliana1E-2128127480 (0)_
AT2G27080.1 11Arabidopsis thaliana1E-2128127480 (0)_
Os01g39290.1 7Oryza sativa6E-3322833490 (0)_
Os01g09880.1 7Oryza sativa1E-1526529502 (2)_
Os05g11010.1 7Oryza sativa1E-1527530490 (0)_
GRMZM2G118951_P01 3.21Zea mays5E-3632131490 (0)_
v1_GRMZM2G118951_P01 4a53Zea mays5E-3632131490 (0)_
GRMZM2G096655_P01 3.21Zea mays3E-3125734490 (0)C
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF2749(1)
TargetP: Chloroplast (Class 4 C0.684; M0.089; S0.047; _0.305)
Predotar:
Subcel. Location: Transmembrane
TM-HMM prediction: 1 TMs
Aramemnon: 1 TMs
TAT position: 76
Length 287 aa (-cTP 247) (-lTP 187)
Molecular Weight 31.44 kDA(-cTP 27.54)(-lTP 20.57)
PI 9.76(-cTP 9.72)(-lTP 9.569)

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
21533090(plasmodesmata-crude)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help