PPDB

The Plant Proteome Database

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AT5G11870.1   Alkaline phytoceramidase (aPHC)

Lab Annot.
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G11870.2 11Arabidopsis thaliana02621001000 (0)M
AT1G71190.1 11Arabidopsis thaliana2E-7525247690 (0)S
AT1G71190.2 11Arabidopsis thaliana7E-5825139570 (0)S
Os01g10100.2 7Oryza sativa4E-8426451680 (0)M
Os01g73120.1 7Oryza sativa4E-8125143670 (0)S
Os01g10100.1 7Oryza sativa1E-3412650650 (0)M
Zm00001eb337900_P001 agpv5Zea mays1E-8125453700 (0)_
GRMZM2G147709_P01 3.21Zea mays4E-8023645670 (0)S
v1_GRMZM2G147709_P01 4a53Zea mays4E-8023645670 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Ceramidase(1) DUF3464(2)
TargetP: Mitochondria (Class 2 C0.003; M0.859; S0.035; _0.112)
Predotar:
Subcel. Location:
TM-HMM prediction: 8 TMs
Aramemnon: 7 TMs
TAT position:
Length 262 aa (-cTP 212)
Molecular Weight 29.82 kDA(-cTP )
PI 9.53(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help