PPDB

PPDB	The Plant Proteome Database

Search PPDB by:

PPDB home page

AT5G11620.1 SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-like protein

Lab Annot.

Mapman: 30.6 signalling.MAP kinases

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G11620.2 11 Arabidopsis thaliana 0 273 100 100 0 (0) C
Os06g36030.1 7 Oryza sativa 2E-52 243 40 55 0 (0) C
v1_GRMZM2G316007_P01 4a53 Zea mays 5E-59 236 43 59 0 (0) _
Zm00001eb384710_P001 agpv5 Zea mays 5E-59 236 43 59 0 (0) _
GRMZM2G316007_P01 3.21 Zea mays 5E-59 236 43 59 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	C1_1(3) GAGA(2) PHD(2) PHD_4(3) RINGv(1) SWIM(1) zf-Di19(3) zf-RING_2(2) Zf_RING
TargetP:	Chloroplast (Class 5 C0.531; M0.103; S0.005; _0.509)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	273 aa (-cTP 211)
Molecular Weight	30.61 kDA(-cTP 23.57)
PI	9.00(-cTP 8.59)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data