PPDB

The Plant Proteome Database

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AT5G11500.1   coiled-coil protein

Lab Annot. J-domain protein DjD2 (type 4)
Mapman: 26.29* misc. DnaJ domain with unknown function
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G11500.2 11Arabidopsis thaliana9E-15921599991 (0)_
Os05g13440.1 7Oryza sativa1E-13521581930 (0)_
Os01g54670.1 7Oryza sativa6E-11521575910 (0)_
Os01g54670.2 7Oryza sativa2E-10421572880 (0)_
GRMZM2G157332_P01 3.21Zea mays6E-13721581950 (0)_
v1_GRMZM2G157332_P01 4a53Zea mays6E-13721581950 (0)_
Zm00001eb350500_P002 agpv5Zea mays6E-13721581950 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: NFACT-R_1(1) Selenoprotein_S(1)
TargetP: Cytoplasm (Class 2 C0.040; M0.166; S0.142; _0.814)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 215 aa (-cTP 207)
Molecular Weight 25.10 kDA(-cTP )
PI 7.79(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
337Detail       bundle sheaths [A. thaliana]Bundle sheath total BS strands wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help