PPDB

 The Plant Proteome Database

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AT5G11430.1   SPOC domain / Transcription elongation factor S-II protein
Lab Annot.
Mapman: 27.3.67 RNA.regulation of transcription.putative transcription regulator
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G11430.3 11Arabidopsis thaliana08731001000 (0)_
AT5G11430.6 11Arabidopsis thaliana061099990 (0)_
AT5G11430.2 11Arabidopsis thaliana061099990 (0)_
Os02g11780.1 7Oryza sativa3E-13364044600 (0)_
Os06g39480.1 7Oryza sativa2E-9555940530 (0)_
Os04g55190.1 7Oryza sativa1E-2819336540 (0)C
v1_GRMZM2G038374_P01 4a53Zea mays5E-12988436540 (0)C
GRMZM2G038374_P01 3.21Zea mays5E-12988436541 (1)C
Zm00001eb205470_P001 agpv5Zea mays2E-12483736520 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: SPOC(1) TFIIS_M(2)
TargetP: Cytoplasm (Class 2 C0.210; M0.155; S0.002; _0.823)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 873 aa (-cTP 845)
Molecular Weight 96.43 kDA(-cTP )
PI 5.26(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 21311031(chloroplasts)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help