PPDB

 The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G11330.1   FAD/NAD(P)-binding oxidoreductase family protein
Lab Annot. monooxygenase protein
Mapman: 26.7 misc.oxidases - copper, flavone etc.
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G11330.2 11Arabidopsis thaliana02531001005 (0)S
AT2G35660.1 11Arabidopsis thaliana1E-11370224018 (18)M
AT5G67030.1 11Arabidopsis thaliana6E-113962240353 (277)C
Os06g39660.1 7Oryza sativa2E-15741652680 (0)S
Os04g37619.2 7Oryza sativa6E-10396223811 (11)C
Os04g37619.1 7Oryza sativa1E-09396223820 (20)C
GRMZM2G004128_P01 3.21Zea mays9E-16440356700 (0)S
Zm00001eb385840_P001 agpv5Zea mays9E-16440356700 (0)S
v1_GRMZM2G004128_P01 4a53Zea mays9E-16440356700 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: DAO(1) FAD_binding_2(1) FAD_binding_3(1) NAD_binding_8(1) Pyr_redox_2(2)
TargetP: Secreted (Class 2 C0.029; M0.018; S0.876; _0.176)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 408 aa (-cTP 397)
Molecular Weight 45.76 kDA(-cTP )
PI 5.12(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
622Detail       leaf [A. thaliana] total leaf tissue wild-type
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)

* For details about the exprimental sources click here.

Published Proteomics Data

 19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help