PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G11190.1   Integrase-type DNA-binding superfamily protein

Lab Annot.
Mapman: 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G25390.2 11Arabidopsis thaliana3E-9118972820 (0)M
AT5G25390.1 11Arabidopsis thaliana8E-8718970800 (0)M
AT1G15360.2 11Arabidopsis thaliana2E-6320055710 (0)M
Os02g10760.1 7Oryza sativa9E-6519455670 (0)M
Os06g40150.1 7Oryza sativa7E-5821947590 (0)M
Os04g56150.1 7Oryza sativa4E-289455680 (0)M
v1_GRMZM2G085678_P01 4a53Zea mays1E-6619255670 (0)_
Zm00001eb235640_P001 agpv5Zea mays1E-6619255670 (0)_
GRMZM2G085678_P01 3.21Zea mays1E-6619255670 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: AP2(2) DUF98(2) OLF(2)
TargetP: Mitochondria (Class 2 C0.021; M0.893; S0.006; _0.273)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 189 aa (-cTP 178)
Molecular Weight 21.41 kDA(-cTP )
PI 5.87(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help