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AT5G11170.2
DEAD/DEAH box RNA helicase family protein
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| Lab Annot. |
DExD box RNA helicase (RH15)
Mapman: 27.5* RNA.DEAD/DEAH BOX helicase |
| Curated Location |
nucleus (Pubmed: 15496452 )
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| Species |
Arabidopsis thaliana
Source:
TAIR Arabidopsis (v.11) |
| Links |
TAIR PeptideAtlas POGS SUBA Uniprot PTM
Get sequence
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Related Genes
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#Spots: The number of publicly accessible spots are in parenthesis
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| Prediction |
| PFAM: |
CMS1(1) DEAD(1) Helicase_C(3) ResIII(1) |
| TargetP: |
Cytoplasm (Class 4 C0.038; M0.175; S0.241; _0.603) |
| Predotar: |
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| Subcel. Location: |
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| TM-HMM prediction: |
No |
| Aramemnon: |
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| TAT position: |
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| Length |
344 aa (-cTP 291) |
| Molecular Weight |
39.09 kDA(-cTP ) |
| PI |
6.38(-cTP ) |
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Experimental Evidence
Expand
View Identified Peptides
View GeneModel
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| Expr* | Spot | MW native | MW denatured | pI native | pI denatured | Type | Mowse | Ambiguity | Tissue | Sample from | Genotype |
| 325 | Detail | | | | | | | | BY2 cell suspension [Tobacco] | cell wall enriched | wild-type |
| 351 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 | wild-type |
| 621 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | clpr4-1 |
| 622 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type |
| 1345 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (5 day HL) | wild-type (rep. 1) |
| 1350 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (5 day HL) | abck2xabck3 (rep. 3) |
| 1395 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | wild-type (rep. 1) |
| 1399 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.14 -rep. 1 | clpp3-1 |
| 1405 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | wild-type |
| 1406 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | wild-type |
| 1407 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | clpr2-1 |
| 1408 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 2. | clpr2-1 |
| 1409 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 1.1 | wild-type |
| 1411 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 1.1 | clpr2-1 |
| 1412 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue 1.07 rep 1.2 | clpr2-1 |
| 1417 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 2) |
| 1418 | Detail | | | | | | | | leaf [A. thaliana] | total tissue (2% sucrose) | clpr4-1 (rep. 3) |
| 1533 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue - 30 uM CAP | clps (rep. 1) |
| 1541 | Detail | | | | | | | | leaf [A. thaliana] | Thylakoids plastoglobule | M-48 |
| 2016 | Detail | | | | | | | | leaf [A. thaliana] | total leaf tissue | prep1-1xprep2-1xopda1-2 |
| 2182 | Detail | | | | | | | | Rosettes [A. thaliana] | total soluble | tic40 and wt |
| 2183 | Detail | | | | | | | | Rosettes [A. thaliana] | total soluble | tic40 and wt |
| 2184 | Detail | | | | | | | | Rosettes [A. thaliana] | total soluble | tic40 and wt |
| 2185 | Detail | | | | | | | | Rosettes [A. thaliana] | total soluble | tic40 and wt |
| 2290 | Detail | | | | | | | | [A. thaliana] | | Clp C1 TRAP |
| 2308 | Detail | | | | | | | | leaf [A. thaliana] | PG plastoglobule | |
| 2312 | Detail | | | | | | | | leaf [A. thaliana] | thylakoids thylakoid membrane | |
| 2316 | Detail | | | | | | | | leaf [A. thaliana] | PG plastoglobule | |
| 2317 | Detail | | | | | | | | leaf [A. thaliana] | PG plastoglobule | |
| 2319 | Detail | | | | | | | | leaf [A. thaliana] | PG plastoglobule | |
* For details about the exprimental sources
click here.
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Published Proteomics Data
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15496452(nucleolus)
16358359(cell suspension (M&Skoog))
16502469(cell suspension-CD-down)
17075075(Cd2+-response proteins root)
18814325(cotyledons)
19525416(leaf (wt and clpr4-1 mutant))
20706207(cell cycle interactome (cell culture))
19114538(guard cells Arabidopsis leaf)
21533090(plasmodesmata-crude)
21166475(cytosolic-fractions-crude)
20813957(SUMO proteome)
21988472(vacuole (unfiltered data))
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Comparative Proteomics Data
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