PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G11060.1   homeobox protein knotted-1-like 4

Lab Annot. KNOTTED1-like homeobox gene 4
Mapman: 27.3.22 RNA.regulation of transcription.HB,Homeobox transcription factor family
Curated Location
TAIR curated location: cytosol & nucleus16463096
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G25220.1 11Arabidopsis thaliana043276800 (0)_
AT5G25220.2 11Arabidopsis thaliana042176800 (0)_
AT4G32040.2 11Arabidopsis thaliana4E-15740461730 (0)C
Os08g19650.1 7Oryza sativa2E-16327383910 (0)_
Os08g19650.2 7Oryza sativa3E-15926684900 (0)_
Os02g08544.1 7Oryza sativa9E-14227174840 (0)_
Zm00001eb234270_P001 agpv5Zea mays6E-14226376860 (0)S
v1_GRMZM2G370332_P01 4a53Zea mays6E-14226376863 (3)S
GRMZM2G370332_P01 3.21Zea mays6E-14226376860 (0)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ELK(1) Homeobox_KN(1) Homeodomain(1) KNOX1(1) KNOX2(1)
TargetP: Cytoplasm (Class 5 C0.481; M0.078; S0.003; _0.482)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 393 aa (-cTP 338)
Molecular Weight 44.38 kDA(-cTP )
PI 5.87(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
2325Detail       leaf [A. thaliana] thylakoids thylakoid membraneabc1k6

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)
19114538(guard cells Arabidopsis leaf)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help