PPDB

The Plant Proteome Database

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AT5G11040.1   TRS120

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os04g42370.1 7Oryza sativa01211637721 (21)_
Zm00001eb078140_P001 agpv5Zea mays0120264790 (0)_
v1_GRMZM2G086371_P01 4a53Zea mays0120264791 (1)_
GRMZM2G086371_P01 3.21Zea mays0120264793 (2)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: TRAPPC-Trs85(1) TRAPPC9-Trs120(4)
TargetP: Cytoplasm (Class 2 C0.065; M0.090; S0.109; _0.770)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 1186 aa (-cTP 1112)
Molecular Weight 129.59 kDA(-cTP )
PI 5.87(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1417Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 2)
1422Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 2)
1453Detail       leaf [A. thaliana] chloroplast nucleoidwild-type (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
2009Detail       leaf [A. thaliana] total leaf tissue wild-type
2012Detail       leaf [A. thaliana] total leaf tissue prep1-1xprep2-1xopda1-2
2248Detail       seedlings [A. thaliana] total tissue wild-type
2286Detail        [A. thaliana] Clp C1 WT
2287Detail        [A. thaliana] Clp C1 WT
2290Detail        [A. thaliana] Clp C1 TRAP
2291Detail        [A. thaliana] Clp C1 TRAP
2297Detail        [A. thaliana] Clp C1 WT
2299Detail        [A. thaliana] Clp C1 TRAP
2300Detail        [A. thaliana] Clp C1 TRAP
2301Detail        [A. thaliana] Clp C1 TRAP
2303Detail        [A. thaliana] Clp C1 WT
2306Detail        [A. thaliana] Clp C1 TRAP

* For details about the exprimental sources click here.

Published Proteomics Data

19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))
19334764(plasma membrane (cell culture))
19376835(leaf phosphoproteins)
21826108(SYP trans-Golgi-filtered)
21166475(cytosolic-fractions-crude)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)
21433285(Crude microsomes cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help