PPDB

The Plant Proteome Database

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AT5G10970.1   C2H2 and C2HC zinc fingers superfamily protein

Lab Annot.
Mapman: 27.3.11 RNA.regulation of transcription.C2H2 zinc finger family
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G25160.1 11Arabidopsis thaliana3E-7726853660 (0)_
AT1G80730.1 11Arabidopsis thaliana1E-2921539530 (0)_
AT1G66140.1 11Arabidopsis thaliana2E-219751580 (0)_
Os03g13600.2 7Oryza sativa1E-177656710 (0)C
Os03g13600.1 7Oryza sativa1E-177656710 (0)C
Os12g39220.1 7Oryza sativa1E-1411241511 (1)_
GRMZM2G157197_P01 3.21Zea mays3E-198949680 (0)_
Zm00001eb010170_P001 agpv5Zea mays3E-198949680 (0)_
v1_GRMZM2G157197_P03 4a53Zea mays3E-198949680 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: PyrI_C(1) RNF111_N(1) zf-C2H2(1) zf-C2H2_4(1) zf-C2H2_6(1)
TargetP: Cytoplasm (Class 5 C0.500; M0.045; S0.134; _0.603)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 272 aa (-cTP 254)
Molecular Weight 30.19 kDA(-cTP )
PI 5.80(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help