PPDB

The Plant Proteome Database

Search PPDB by:

HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink
HyperLink HyperLink HyperLink

 

PPDB home page

AT5G10960.1   Polynucleotidyl transferase%2C ribonuclease H-like superfamily protein

Lab Annot.
Mapman: 27.2 RNA.transcription
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT1G80780.1 11Arabidopsis thaliana5E-14227070820 (0)_
AT1G80780.2 11Arabidopsis thaliana5E-14227070820 (0)_
AT1G80780.3 11Arabidopsis thaliana8E-14126970820 (0)_
Os02g55300.1 7Oryza sativa1E-12726464780 (0)_
Os09g24990.1 7Oryza sativa8E-12727364769 (9)_
Os09g24990.2 7Oryza sativa8E-12727364769 (9)_
v1_GRMZM2G179633_P01 4a53Zea mays1E-12826864780 (0)_
Zm00001eb257850_P001 agpv5Zea mays1E-12826864780 (0)_
GRMZM2G179633_P01 3.21Zea mays1E-12826864780 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: CAF1(2)
TargetP: Cytoplasm (Class 2 C0.040; M0.104; S0.159; _0.920)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 277 aa (-cTP 266)
Molecular Weight 31.53 kDA(-cTP )
PI 4.93(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

18463617(suspension cells-phosphorylated proteins)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help