PPDB

The Plant Proteome Database

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AT5G10940.1   transducin family protein / WD-40 repeat family protein

Lab Annot. transducin protein / WD-40 repeat protein
Mapman: 27.3.67 RNA.regulation of transcription.putative transcription regulator
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G10940.2 11Arabidopsis thaliana075799991 (1)_
AT3G45620.1 11Arabidopsis thaliana3E-4131534500 (0)_
AT3G45620.2 11Arabidopsis thaliana3E-4028836510 (0)_
Os03g08830.1 7Oryza sativa076257740 (0)_
Os10g39760.1 7Oryza sativa1E-3627734522 (2)M
Os03g17780.1 7Oryza sativa1E-3428531500 (0)C
Zm00001eb006570_P001 agpv5Zea mays076455720 (0)_
Zm00001eb006570_P002 agpv5Zea mays076455720 (0)_
Zm00001eb401530_P001 agpv5Zea mays076254710 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: ANAPC4_WD40(3) Ribophorin_II(2) WD40(6)
TargetP: Cytoplasm (Class 4 C0.311; M0.091; S0.043; _0.672)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 757 aa (-cTP 704)
Molecular Weight 83.83 kDA(-cTP )
PI 5.54(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
543Detail       leaf [A. thaliana] stroma (FPLC) >600 kDa (HMA) wild-type
1577Detail       leaf [A. thaliana] TiO2 thylakoid membraneWT

* For details about the exprimental sources click here.

Published Proteomics Data

17317660(Plasma Membrane proteome)
19376835(leaf phosphoproteins)
21533090(plasmodesmata-crude)
21768351(Leaf-Phosphoproteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help