PPDB

 The Plant Proteome Database

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AT5G10800.1   RNA recognition motif (RRM)-containing protein
Lab Annot.
Mapman: 27.4 RNA.RNA binding
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G10800.3 11Arabidopsis thaliana081299990 (0)_
AT5G10800.2 11Arabidopsis thaliana075596960 (0)_
AT5G25060.1 11Arabidopsis thaliana094974833 (0)_
Os02g08360.1 7Oryza sativa0945607310 (10)_
Os04g37690.2 6Oryza sativa6E-078732522 (2)C
Os04g37690.1 7Oryza sativa9E-078732524 (4)C
Zm00001eb233960_P002 agpv5Zea mays092461740 (0)_
v1_GRMZM2G133308_P02 4a53Zea mays0785667811 (11)S
Zm00001eb234030_P001 agpv5Zea mays079865770 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: CID(1) CTK3(1) cwf21(1) RRM_1(1) Surp(1)
TargetP: Cytoplasm (Class 2 C0.145; M0.106; S0.008; _0.915)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 947 aa (-cTP 909)
Molecular Weight 109.18 kDA(-cTP )
PI 8.45(-cTP )

Experimental Evidence

 

View GeneModel  

* For details about the exprimental sources click here.

Published Proteomics Data

 20706207(cell cycle interactome (cell culture))

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help