PPDB

The Plant Proteome Database

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AT5G10780.1   ER membrane protein complex subunit-like protein

Lab Annot. unknown protein
Mapman: 35.2 not assigned.unknown
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G10780.2 11Arabidopsis thaliana2E-1211681001007 (3)_
Os03g24580.1 7Oryza sativa2E-72181708230 (30)_
Os03g24580.2 7Oryza sativa2E-5414968810 (0)_
v1_GRMZM2G157729_P01 4a53Zea mays6E-73177688417 (16)_
GRMZM2G157729_P01 3.21Zea mays6E-73177688415 (15)_
Zm00001eb394360_P001 agpv5Zea mays6E-7317768840 (0)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: DUF1077(1)
TargetP: Cytoplasm (Class 4 C0.063; M0.323; S0.050; _0.663)
Predotar:
Subcel. Location:
TM-HMM prediction: 2 TMs
Aramemnon: 2 TMs
TAT position:
Length 180 aa (-cTP 83)
Molecular Weight 19.91 kDA(-cTP )
PI 6.91(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
371Detail       leaf [A. thaliana] total leaf tissue clpr4-1
528Detail       leaf [A. thaliana] total leaf tissue wild-type (wt2)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

19334764(plasma membrane (cell culture))
21173025(root proteome)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help