PPDB

 The Plant Proteome Database

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AT5G10770.1   Eukaryotic aspartyl protease family protein
Lab Annot. aspartic protease
Mapman: 29.5.4.1.1* protein.degradation.aspartate protease.AA.A1
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G10760.1 11Arabidopsis thaliana0478657629 (1)S
AT1G79720.1 11Arabidopsis thaliana1E-88435425640 (12)S
AT1G01300.1 11Arabidopsis thaliana1E-76407395535 (27)S
Os09g30414.1 7Oryza sativa3E-13146046632 (2)M
Os06g40818.1 7Oryza sativa1E-122442445912 (12)M
Os02g48860.1 7Oryza sativa1E-11046040590 (0)M
Zm00001eb316350_P001 agpv5Zea mays3E-13645247610 (0)S
GRMZM2G112337_P02 3.21Zea mays9E-13247444594 (4)S
GRMZM2G112337_P01 3.21Zea mays9E-13247444594 (4)S
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Asp(1) TAXi_C(1) TAXi_N(3)
TargetP: Secreted (Class 5 C0.205; M0.004; S0.276; _0.052)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 474 aa (-cTP 420)
Molecular Weight 49.86 kDA(-cTP )
PI 8.48(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
324Detail       leaf [A. thaliana] cell wall enriched wild-type
1265Detail       leaf [A. thaliana] co-IP SHOOT1 (rep. 3) thylakoid membraneshoot1 (null mutant)
1615Detail       Natural Senescence leaf [A. thaliana]  
2209Detail       leaf [A. thaliana] total leaf tissue Clp P5 Trapst 10
2210Detail       leaf [A. thaliana] total leaf tissue Clp P5 strepII st28
2214Detail       leaf [A. thaliana] total leaf tissue Clp P5 st
2215Detail       leaf [A. thaliana] total leaf tissue Clp P5 trap st
2216Detail       leaf [A. thaliana] total leaf tissue Clp P5 st
2226Detail       leaf [A. thaliana] total leaf tissue wild-type
2262Detail       leaf [A. thaliana] stroma Clp Clp C1 wild-type
2263Detail       leaf [A. thaliana] stroma Clp Clp C1 trap
2286Detail        [A. thaliana] Clp C1 WT
2287Detail        [A. thaliana] Clp C1 WT
2288Detail        [A. thaliana] Clp C1 WT
2289Detail        [A. thaliana] Clp C1 TRAP
2290Detail        [A. thaliana] Clp C1 TRAP
2291Detail        [A. thaliana] Clp C1 TRAP
2296Detail        [A. thaliana] Clp C1 WT
2297Detail        [A. thaliana] Clp C1 WT
2298Detail        [A. thaliana] Clp C1 WT
2300Detail        [A. thaliana] Clp C1 TRAP
2301Detail        [A. thaliana] Clp C1 TRAP
2302Detail        [A. thaliana] Clp C1 WT
2303Detail        [A. thaliana] Clp C1 WT
2399Detail       leaf-soluble [A. thaliana] GFP-nano-trap wt/DUF760-1GFP/ClpC1WTSTREP

* For details about the exprimental sources click here.

Published Proteomics Data

 18796151(cell wall (hypocotyl))
19036721(sterol dependent detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19036721(detergent resistant plasma membrane (DRM) proteins (Cell cultures))
19334764(plasma membrane (cell culture))
WallDB-E.Jamet(cell wall reference proteome)
21413152(Xylem-sap (BrassicaOleracea))
21109274(cellwall-glycoproteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help