PPDB

PPDB	The Plant Proteome Database

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AT5G10690.1 pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein

Lab Annot.

Pentatricopeptide repeat (PPR) protein
Mapman: 27.6* RNA.pentatricopeptide (PPR) repeat-containing protein

Curated Location

plastid nucleoid (Pubmed: 23198870 )

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G10690.2 11 Arabidopsis thaliana 0 580 100 100 0 (0) C
AT1G12775.1 11 Arabidopsis thaliana 8E-20 283 25 48 0 (0) M
AT1G09680.1 11 Arabidopsis thaliana 1E-19 338 28 44 0 (0) M
Os09g26190.1 7 Oryza sativa 3E-179 566 48 66 0 (0) _
Os03g10420.1 7 Oryza sativa 4E-19 379 26 45 0 (0) _
Os01g63400.1 7 Oryza sativa 9E-18 332 24 44 0 (0) _
GRMZM2G019901_P02 3.21 Zea mays 0 536 54 72 19 (19) C
Zm00001eb099850_P004 agpv5 Zea mays 0 536 54 72 0 (0) C
v1_AC206761.3_FGP002 4a53 Zea mays 6E-132 374 51 69 7 (7) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	CBS(2) PPR(9) PPR_1(6) PPR_2(6) PPR_3(5) PPR_long(2) TPR_14(5) TPR_19(3)
TargetP:	Chloroplast (Class 3 C0.788; M0.199; S0.008; _0.032)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	580 aa (-cTP 518)
Molecular Weight	64.49 kDA(-cTP 57.36)
PI	8.66(-cTP 6.01)

Experimental Evidence

Expand

* For details about the exprimental sources click here.

Published Proteomics Data

21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)

Comparative Proteomics Data