PPDB

 The Plant Proteome Database

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AT5G10460.1   Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
Lab Annot. haloacid dehalogenase-like hydrolase
Mapman: 3.2 minor CHO metabolism.trehalose
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
Os08g42950.1 7Oryza sativa2E-140296667910 (10)_
GRMZM2G045135_P01 3.21Zea mays4E-139294668014 (14)_
Zm00001eb037350_P003 agpv5Zea mays4E-13929466800 (0)_
v1_GRMZM2G045135_P01 4a53Zea mays4E-139294668016 (16)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: Acid_phosphat_B(1) HAD_2(2) Hydrolase(2) Hydrolase_6(1) Hydrolase_like(1) Trehal
TargetP: Cytoplasm (Class 3 C0.137; M0.080; S0.051; _0.708)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 306 aa (-cTP 239)
Molecular Weight 33.03 kDA(-cTP )
PI 5.81(-cTP )

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
339Detail       leaf [A. thaliana] chloroplast stromawild-type
544Detail       leaf [A. thaliana] stroma (FPLC) <600 kDa (LMA) wild-type
621Detail       leaf [A. thaliana] total leaf tissue clpr4-1
622Detail       leaf [A. thaliana] total leaf tissue wild-type
874Detail       leaf [A. thaliana] chloroplast stromawild-type
1392Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1394Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1481Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 1)
1483Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 2)
1485Detail       leaf [A. thaliana] chloroplast stromawild-type (rep. 3)
1941Detail       leaf [A. thaliana] stroma WT stromawild-type
1942Detail       leaf [A. thaliana] stroma WT stromawild-type
1944Detail       leaf [A. thaliana] stroma UVR stromaUVR
1946Detail       leaf [A. thaliana] stroma UVR stromawild-type
1947Detail       leaf [A. thaliana] stroma ClpS stromaclpS
2001Detail       leaf [A. thaliana] stroma ClpS stromaclpS1

* For details about the exprimental sources click here.

Published Proteomics Data

 18431481(chloroplast)
19546170(mature pollen grains)
20423899(chloroplast)
21173025(root proteome)

Comparative Proteomics Data

©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help