PPDB

PPDB	The Plant Proteome Database

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AT5G10380.1 RING/U-box superfamily protein

Lab Annot.

RING/U-box protein
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT1G72220.1 11 Arabidopsis thaliana 1E-38 158 46 60 0 (0) _
AT4G33565.1 11 Arabidopsis thaliana 3E-32 82 63 82 0 (0) _
AT5G17600.1 11 Arabidopsis thaliana 2E-30 78 67 80 0 (0) _
Os04g37740.1 7 Oryza sativa 2E-28 96 52 67 0 (0) _
Os02g36330.1 7 Oryza sativa 3E-28 83 57 69 0 (0) _
Os09g29370.1 7 Oryza sativa 4E-28 201 35 50 0 (0) _
v1_GRMZM2G171277_P02 4a53 Zea mays 1E-27 83 55 74 0 (0) M
GRMZM2G171277_P01 3.21 Zea mays 1E-27 83 55 74 0 (0) M
Zm00001eb081320_P001 agpv5 Zea mays 1E-27 83 55 74 0 (0) M
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	FANCL_C(1) PHD(1) PRIMA1(1) Prok-RING_1(2) Prok-RING_4(1) RINGv(1) zf-ANAPC11(1)
TargetP:	Mitochondria (Class 4 C0.034; M0.423; S0.120; _0.071)
Predotar:
Subcel. Location:
TM-HMM prediction:	1 TMs
Aramemnon:	1 TMs
TAT position:
Length	301 aa (-cTP 256)
Molecular Weight	34.04 kDA(-cTP )
PI	6.59(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

Comparative Proteomics Data