PPDB

PPDB	The Plant Proteome Database

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AT5G10370.1 helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-like protein

Lab Annot.

helicase domain-containing protein / IBR domain-containing protein / zinc finger protein-related
Mapman: 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT4G01020.1 11 Arabidopsis thaliana 0 1775 94 97 0 (0) C
AT3G26560.1 11 Arabidopsis thaliana 4E-129 648 37 58 10 (2) _
AT4G16680.2 11 Arabidopsis thaliana 6E-116 699 36 53 0 (0) _
Os07g42900.1 7 Oryza sativa 0 1259 49 68 0 (0) _
Os02g19860.1 7 Oryza sativa 1E-125 646 37 58 5 (5) _
Os06g23530.1 7 Oryza sativa 7E-123 646 38 57 0 (0) M
Zm00001eb327760_P001 agpv5 Zea mays 0 1531 50 68 0 (0) _
GRMZM5G855311_P01 3.21 Zea mays 0 1688 46 64 0 (0) M
v1_GRMZM2G381488_P01 4a53 Zea mays 0 1458 50 68 0 (0) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	AAA_19(1) AAA_22(1) AAA_29(1) AAA_30(1) ABC_tran(1) DEAD(1) HA2(1) Helicase_C(1)
TargetP:	Chloroplast (Class 3 C0.805; M0.283; S0.001; _0.064)
Predotar:
Subcel. Location:	Stroma
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	1775 aa (-cTP 1742)
Molecular Weight	201.36 kDA(-cTP 197.65)
PI	7.53(-cTP 7.10)

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

22060019(phosphoproteome - N-starved seedlings)

Comparative Proteomics Data