PPDB

PPDB	The Plant Proteome Database

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AT5G10350.1 RNA-binding (RRM/RBD/RNP motifs) family protein

Lab Annot.

RNA-binding (RRM/RBD/RNP motifs) protein
Mapman: 27.1 RNA.processing

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G10350.2 11 Arabidopsis thaliana 4E-149 202 100 100 1 (1) _
AT5G65260.1 11 Arabidopsis thaliana 8E-124 221 84 90 20 (4) _
AT5G51120.1 11 Arabidopsis thaliana 1E-85 179 72 82 49 (19) _
Os02g52140.2 7 Oryza sativa 4E-101 218 72 79 17 (17) _
Os02g52140.1 7 Oryza sativa 2E-100 219 71 78 17 (17) _
Os06g11620.1 7 Oryza sativa 6E-85 205 68 78 12 (12) _
Zm00001eb255450_P001 agpv5 Zea mays 3E-102 218 72 79 0 (0) _
GRMZM5G862331_P04 3.21 Zea mays 3E-102 218 72 79 9 (9) _
v1_GRMZM2G108919_P01 4a53 Zea mays 5E-97 216 71 79 8 (8) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	betaPIX_CC(1) DUF436(1) FTA4(1) RRM_1(1) Tektin(1) YabA(1)
TargetP:	Cytoplasm (Class 2 C0.147; M0.089; S0.082; _0.907)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	217 aa (-cTP 208)
Molecular Weight	24.80 kDA(-cTP )
PI	4.86(-cTP )

Experimental Evidence

Expand

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
2192	Detail								[A. thaliana]	total soluble	P3-trap-strepII 16

* For details about the exprimental sources click here.

Published Proteomics Data

17151019(vacuole - suspension cell)

Comparative Proteomics Data