PPDB

 The Plant Proteome Database

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AT5G10260.1   RAB GTPase homolog H1E
Lab Annot. AtRABH1e (Arabidopsis Rab GTPase homolog H1e); GTP binding
Mapman: 30.5 signalling.G-proteins
Curated Location
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT2G22290.1 11Arabidopsis thaliana8E-138207899519 (19)_
AT2G44610.1 11Arabidopsis thaliana2E-1332088794115 (112)_
AT4G39890.1 11Arabidopsis thaliana2E-119198849321 (21)S
Os07g31370.1 7Oryza sativa2E-129208889444 (44)_
Os03g09140.1 7Oryza sativa2E-12321179890 (0)S
Os03g09140.2 7Oryza sativa8E-9715785940 (0)S
Zm00001eb105510_P001 agpv5Zea mays1E-13420888940 (0)_
GRMZM2G169694_P01 3.21Zea mays1E-134208889444 (40)_
GRMZM2G075719_P01 3.21Zea mays8E-134208879444 (40)_
Show all       

#Spots: The number of publicly accessible spots are in parenthesis
Prediction
PFAM: AAA_7(1) Arf(1) FeoB_N(2) GTP_EFTU(1) Gtr1_RagA(1) MMR_HSR1(1) Ras(1) Roc(1) Rsg
TargetP: Cytoplasm (Class 4 C0.058; M0.130; S0.395; _0.609)
Predotar:
Subcel. Location:
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 207 aa (-cTP 179)
Molecular Weight 23.13 kDA(-cTP )
PI 7.67(-cTP )

Experimental Evidence

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View Identified Peptides  

View GeneModel  
Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1394Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1395Detail       leaf [A. thaliana] total leaf tissue wild-type (rep. 1)
1396Detail       leaf [A. thaliana] total leaf tissue clpt1xclpt2 (rep. 2)
1400Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1401Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1402Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 wild-type
1403Detail       leaf [A. thaliana] total leaf tissue 1.14 -rep. 1 clpp3-1
1410Detail       leaf [A. thaliana] total leaf tissue 1.07 rep 1.2 wild-type
1418Detail       leaf [A. thaliana] total tissue (2% sucrose) clpr4-1 (rep. 3)
1441Detail       leaf [A. thaliana] total tissue (0 day HL) wild-type (rep. 3)
1442Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 1)
1443Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 2)
1444Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1447Detail       leaf [A. thaliana] total tissue (3 day HL) wild-type (rep. 3)
1450Detail       leaf [A. thaliana] total tissue (0 day HL) abck2xabck3 (rep. 3)
1529Detail       leaf [A. thaliana] total leaf tissue - 0 uM CAP wild-type (rep. 1)
1534Detail       leaf [A. thaliana] total leaf tissue - 40 uM CAP clps (rep. 1)
1828Detail       leaf [A. thaliana] Thylakoids thylakoid membraneCol-0 Fluctuating light
2008Detail       leaf [A. thaliana] RNAi PG plastoglobuleRNAi
2030Detail       leaf [A. thaliana] over expressed M48 plastoglobuleM48
2246Detail       seedlings [A. thaliana] total tissue gfs9
2268Detail       seedlings [A. thaliana] total tissue wild-type
2270Detail       seedlings [A. thaliana] total tissue wild-type
2271Detail       seedlings [A. thaliana] total tissue wild-type

* For details about the exprimental sources click here.

Published Proteomics Data

 19546170(mature pollen grains)
19525416(leaf (wt and clpr4-1 mutant))

Comparative Proteomics Data

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