PPDB

PPDB	The Plant Proteome Database

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AT5G10240.1 asparagine synthetase 3

Lab Annot.

asparagine synthetase 3
Mapman: 13.1.3.1.1 amino acid metabolism.synthesis.aspartate family.asparagine.asparagine synthetase

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT5G10240.2 11 Arabidopsis thaliana 0 578 99 99 4 (4) _
AT5G65010.1 11 Arabidopsis thaliana 0 551 94 97 358 (258) _
AT5G65010.2 11 Arabidopsis thaliana 0 552 94 97 358 (258) _
Os06g15420.1 7 Oryza sativa 0 562 87 94 50 (50) C
Os03g18130.1 7 Oryza sativa 0 545 73 84 0 (0) M
Os03g18130.4 7 Oryza sativa 0 520 73 85 0 (0) M
Zm00001eb380080_P001 agpv5 Zea mays 0 579 82 91 0 (0) C
GRMZM2G074589_P01 3.21 Zea mays 0 579 82 91 22 (22) C
v1_GRMZM2G074589_P01 4a53 Zea mays 0 579 82 91 17 (17) C
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	Asn_synthase(1) DUF3700(1) GATase_6(1) GATase_7(1) NAD_synthase(1)
TargetP:	Cytoplasm (Class 5 C0.303; M0.233; S0.097; _0.391)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	578 aa (-cTP 567)
Molecular Weight	65.23 kDA(-cTP )
PI	6.11(-cTP )

Experimental Evidence

Expand

View Identified Peptides

View GeneModel

Expr*	Spot	MW native	MW denatured	pI native	pI denatured	Type	Mowse	Ambiguity	Tissue	Sample from	Genotype
1447	Detail								leaf [A. thaliana]	total tissue (3 day HL)	wild-type (rep. 3)
1530	Detail								leaf [A. thaliana]	total leaf tissue - 30 uM CAP	wild-type (rep. 1)
2011	Detail								leaf [A. thaliana]	total leaf tissue	opda1-2
2183	Detail								Rosettes [A. thaliana]	total soluble	tic40 and wt

* For details about the exprimental sources click here.

Published Proteomics Data

17407188(cotyledon)
21166475(cytosolic-fractions-crude)
21166475(cytosol-enriched&curated)
21173025(root proteome)

Comparative Proteomics Data