PPDB

PPDB	The Plant Proteome Database

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AT5G09880.1 Splicing factor%2C CC1-like protein

Lab Annot.

Splicing factor, CC1-like
Mapman: 27.4 RNA.RNA binding

Curated Location

Species

Arabidopsis thaliana Source: TAIR Arabidopsis (v.11)

Links

TAIR PeptideAtlas POGS SUBA Uniprot PTM Get sequence

Related Genes

Acc ver Species Evalue Matchlen %Iden %Similar #spots TargetP
AT2G16940.2 11 Arabidopsis thaliana 2E-157 616 48 60 2 (0) _
AT2G16940.1 11 Arabidopsis thaliana 4E-157 568 51 64 2 (0) _
AT2G16940.3 11 Arabidopsis thaliana 3E-155 605 49 61 2 (0) _
Os03g05830.1 7 Oryza sativa 9E-158 419 60 71 0 (0) _
Os10g30370.1 7 Oryza sativa 1E-133 337 63 75 2 (2) _
Os10g30370.2 7 Oryza sativa 3E-118 318 61 73 2 (2) _
Zm00001eb403170_P003 agpv5 Zea mays 5E-180 546 56 67 0 (0) _
Zm00001eb222690_P005 agpv5 Zea mays 1E-174 561 55 65 0 (0) _
v1_GRMZM2G071589_P02 4a53 Zea mays 1E-174 561 55 65 1 (1) _
Show all

#Spots: The number of publicly accessible spots are in parenthesis

Prediction

PFAM:	LAP1C(1) Nup35_RRM_2(2) RBM39linker(1) RRM_1(3) RRM_7(3) RRM_occluded(3)
TargetP:	Cytoplasm (Class 2 C0.202; M0.061; S0.031; _0.907)
Predotar:
Subcel. Location:
TM-HMM prediction:	No
Aramemnon:
TAT position:
Length	527 aa (-cTP 513)
Molecular Weight	59.38 kDA(-cTP )
PI	6.26(-cTP )

Experimental Evidence

View GeneModel

* For details about the exprimental sources click here.

Published Proteomics Data

19114538(guard cells Arabidopsis leaf)
21173025(root proteome)

Comparative Proteomics Data