PPDB

The Plant Proteome Database

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AT5G09840.1   Putative endonuclease or glycosyl hydrolase

Lab Annot. Putative endonuclease or glycosyl hydrolase
Mapman: 35.2 not assigned.unknown
Curated Location
TAIR curated location: mitochondrion14671022
Species Arabidopsis thaliana     Source: TAIR Arabidopsis (v.11)
Links TAIR   PeptideAtlas   POGS   SUBA   Uniprot   PTM     Get sequence
Related Genes

AccverSpeciesEvalueMatchlen%Iden%Similar#spotsTargetP
AT5G64710.1 11Arabidopsis thaliana090748630 (0)C
AT5G64710.2 11Arabidopsis thaliana076448610 (0)_
AT5G61180.1 11Arabidopsis thaliana2E-3419637550 (0)_
Os12g06560.1 7Oryza sativa3E-8828151690 (0)M
Os11g06680.2 7Oryza sativa4E-8528848690 (0)M
Os11g06680.1 7Oryza sativa4E-8528848690 (0)M
v1_GRMZM2G360698_P01 4a53Zea mays2E-9436144650 (0)M
GRMZM2G360698_P01 3.21Zea mays2E-9436144650 (0)M
v1_GRMZM2G360698_P02 4a53Zea mays3E-9436144650 (0)M
Show all       

#Spots: The number of publicly accessible spots are in parenthesis

Prediction
PFAM: Blt1_C(2) NYN(1) OHA(1) OST-HTH(2)
TargetP: Chloroplast (Class 3 C0.823; M0.368; S0.003; _0.003)
Predotar:
Subcel. Location: Stroma
TM-HMM prediction: No
Aramemnon:
TAT position:
Length 924 aa (-cTP 852)
Molecular Weight 102.37 kDA(-cTP 94.44)
PI 7.08(-cTP 6.29)

Experimental Evidence

Expand

View Identified Peptides  

View GeneModel  

Expr*SpotMW nativeMW denaturedpI nativepI denaturedTypeMowseAmbiguityTissueSample fromGenotype
1871Detail       Total leaf [A. thaliana] Stroma wild-type
1873Detail       Total leaf [A. thaliana] Stroma wild-type
1874Detail       Total leaf [A. thaliana] total soluble wild-type
1875Detail       Total leaf [A. thaliana] total soluble wild-type
2185Detail       Rosettes [A. thaliana] total soluble tic40 and wt

* For details about the exprimental sources click here.

Published Proteomics Data

MitoDB(Mitochondrial proteome)
20733066(phosphoproteome-ABA-leaf)
21768351(Leaf-Phosphoproteome)
21472856(mitochondrial-reference-proteome-Millar-Nov2011)
21433285(Crude microsomes cell_cultures)
21433285(purified Plasma membrane -cell_cultures)

Comparative Proteomics Data


©Klaas J. van Wijk Lab, Cornell University   Web Accessibility Help